TLCD4-RWDD3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TLCD4-RWDD3 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TLCD4-RWDD3-associated genes across cancer lineages are C5orf64, LILRP1, and MIR147A. Each is linked with TLCD4-RWDD3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TLCD4-RWDD3-to-partner and partner-to-TLCD4-RWDD3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C5orf64 grouped by TLCD4-RWDD3-low versus TLCD4-RWDD3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TLCD4-RWDD3→partner) and Y-score (partner→TLCD4-RWDD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC5orf64 →+0.106+3.697<.001.00731
UCECLILRP1 →+0.146+3.422.002.00931
UCECMIR147A →+0.339+4.260<.001.00731
UCECIGHD1-26 →+1.170+4.069<.001.00231
UCECIGHD3-9 →+1.795+4.120.005.00131
UCECHMGB1P17 →+0.241+3.200<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

C5orf64 by TLCD4-RWDD3 expression — UCEC

Box plot of C5orf64 in TLCD4-RWDD3-low vs TLCD4-RWDD3-high samples in UCEC.

Explore this box plot interactively →

Exploration