Across TCGA patient cohorts, STK39 mutation is significantly associated with the RNA expression of many other genes, with 2,718 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible STK39-associated genes across cancer lineages are ATP6V1E1P2, TAF9, and RN7SKP214. Each is linked with STK39 in more than 1 cancer types. Because this analysis shows association rather than direction, both STK39-to-partner and partner-to-STK39 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STK39→partner) and Y-score (partner→STK39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIHC	ATP6V1E1P2 →	+0.123	+5.647	<.001	.004	3	2
UCEC	TAF9 →	+0.567	+1.807	<.001	<.001	3	2
COAD	RN7SKP214 →	+0.500	+3.997	<.001	<.001	3	2
COAD	RNA5SP139 →	+0.628	+3.306	<.001	.002	3	2
COAD	H3P27 →	+0.056	+4.136	.004	.008	3	2
COAD	CYCSP49 →	+0.118	+4.557	<.001	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,718 associations by consensus.

Exploration

STK39 survival (RNA) · tumor vs normal (RNA) · all STK39 data types