SPINK5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPINK5 mutation is significantly associated with the RNA expression of many other genes, with 449 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SPINK5-associated genes across cancer lineages are ASB18, KRTAP20-2, and MAGEB4. Each is linked with SPINK5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPINK5-to-partner and partner-to-SPINK5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASB18 grouped by SPINK5-low versus SPINK5-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPINK5→partner) and Y-score (partner→SPINK5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaASB18 →+0.035+5.539<.001.00332
OVARYKRTAP20-2 →+0.096+4.781<.001<.00131
SKINMAGEB4 →+0.006+4.022<.001.00631
SKINSPAG11A →+0.036+4.022<.001.00631
SKINKRTAP6-1 →+0.050+4.022<.001.00631
SKINRTP2 →+0.019+3.632<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 449 associations by consensus.

ASB18 by SPINK5 expression — BLOOD_Leukemia

Box plot of ASB18 in SPINK5-low vs SPINK5-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration