SPCS3-AS1

associated omics data
SPCS3 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored SPCS3-AS1 profile across patient tissues and cancer cell-line models. SPCS3-AS1 expression is associated with patient survival in 12 of 34 cancer types, with the highest sampling consensus in LUSC. Among the 18 cancer types available for tumor–normal comparison, SPCS3-AS1 is differentially expressed in 8, with the highest sampling consensus in KIRP. Additionally, SPCS3-AS1 RNA expression shows 6,867 significant gene co-expression associations, with the highest sampling consensus in DLBC. Together, these results highlight LUSC, KIRP, and DLBC as cancer lineages where SPCS3-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SPCS3-AS1 survival associations across molecular data types. SPCS3-AS1 RNA expression shows survival associations in the most cancer types (12). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SPCS3-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier12LUSC (30)view →
This table ranks reproducible SPCS3-AS1 RNA expression–survival associations across cancer types. High SPCS3-AS1 expression shows unfavorable associations in LUSC, MESO, ACC, KICH and STAD, but favorable associations in HNSC. The LUSC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .007). Together, the overview and detailed table identify LUSC as the clearest survival context for SPCS3-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUSCOSTertileAll0.7250.827.00730view →
MESODFSTertileAll0.1130.485.00327view →
ACCOSTertileIII,IV0.1890.757<.00118view →
HNSCDFSTertileAll0.8440.682.02018view →
KICHDFSQuartileII,III,IV0.2230.874.00511view →
STADDFSTertileIV0.0830.379.0019view →
Pink = unfavorable, green = favorable. all 12 lineages →

SPCS3-AS1-LUSC (OS)

Kaplan–Meier survival curve for SPCS3-AS1 RNA expression in LUSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SPCS3-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in KIRP for RNA.
SPCS3-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8KIRP (7)view →
This table ranks reproducible tumor–normal expression differences for SPCS3-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SPCS3-AS1 shows lower tumor expression in KIRP, KIRC, THCA and KICH and higher tumor expression in LUAD and UCEC. The KIRP box plot shows higher SPCS3-AS1 RNA expression in normal versus tumor tissue (log2 FC = −0.305, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRPAllII,III,IV−0.305<.0017view →
KIRCAllAll−0.139<.0014view →
LUADAllIII,IV+0.060.0214view →
THCAAllAll−0.056.0143view →
UCECAllIII,IV+0.213.0462view →
KICHAllAll−0.156.0112view →
Green = repressed in tumor. all 8 lineages →

SPCS3-AS1-KIRP

Tumor-vs-normal expression box plot for SPCS3-AS1 in KIRP.

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Cross-omics associations

This table shows molecular features associated with SPCS3-AS1 in patient tissues and cancer cell lines. In patient samples, SPCS3-AS1 shows the broadest associations at the RNA and protein expression levels, with DLBC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA6,867DLBC (1953)view →
Function (RNA)6,281STAD (4720)view →