SNHG1

Across TCGA patient cohorts, SNHG1 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,715 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNHG1-associated proteins across cancer lineages are DNAJC9, FEN1, and TOP2A. Each is linked with SNHG1 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNHG1-to-partner and partner-to-SNHG1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNHG1 versus DNAJC9 in BRCA, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNHG1→partner) and Y-score (partner→SNHG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	DNAJC9 →	+0.405	+0.518	<.001	<.001	3	9
BRCA	FEN1 →	+0.519	+0.622	<.001	<.001	3	9
UCEC	TOP2A →	+1.006	+0.772	<.001	<.001	3	8
UCEC	TOP2A_S1247 →	+1.069	+0.509	<.001	<.001	3	8
GBM	TRIM33_S862 →	+0.731	+0.607	<.001	<.001	3	8
OV	MCM3 →	+0.627	+0.459	.005	.008	2	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,715 associations by consensus.

SNHG1 vs DNAJC9 — BRCA

Explore this scatter interactively →