SND1-IT1

Across TCGA patient cohorts, SND1-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,025 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SND1-IT1-associated proteins across cancer lineages are TNPO3, CAST, and AGK. Each is linked with SND1-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SND1-IT1-to-partner and partner-to-SND1-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SND1-IT1 versus TNPO3 in CCRCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SND1-IT1→partner) and Y-score (partner→SND1-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	TNPO3 →	+0.278	+0.552	<.001	<.001	3	4
GBM	CAST →	-0.240	-0.321	<.001	.001	3	3
LUAD	AGK →	+0.318	+0.575	<.001	<.001	3	3
HNSC	CRMP1 →	+0.681	+0.474	<.001	.003	3	3
LSCC	AHNAK2 →	-0.581	-0.332	.006	.007	3	3
HNSC	EEPD1_S173 →	+0.503	+0.761	.001	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,025 associations by consensus.

SND1-IT1 vs TNPO3 — CCRCC

Explore this scatter interactively →