SND1-IT1

associated omics data
SND1 intronic transcript 1Genealiases: C7orf54 · NAG8 · NSG-X

Q-omics provides the consensus-scored SND1-IT1 profile across patient tissues and cancer cell-line models. SND1-IT1 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, SND1-IT1 is differentially expressed in 10, with the highest sampling consensus in HNSC. Additionally, SND1-IT1 RNA expression shows 11,873 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight ACC, HNSC, and THYM as cancer lineages where SND1-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SND1-IT1 survival associations across molecular data types. SND1-IT1 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SND1-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24ACC (68)view →
This table ranks reproducible SND1-IT1 RNA expression–survival associations across cancer types. High SND1-IT1 expression shows unfavorable associations in ACC, BLCA, LIHC and KIRC, but favorable associations in CESC and LGG. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .001). Together, the overview and detailed table identify ACC as the clearest survival context for SND1-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSQuartileAll0.3930.698.00168view →
BLCAOSTertileAll0.3640.679.00166view →
LIHCOSTertileAll0.3500.616.00150view →
KIRCOSMedianAll0.5600.690<.00150view →
CESCOSMedianIII,IV0.8720.599.00242view →
LGGOSMedianAll0.9410.848<.00137view →
Pink = unfavorable, green = favorable. all 24 lineages →

SND1-IT1-ACC (DFS)

Kaplan–Meier survival curve for SND1-IT1 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SND1-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10. The strongest signals are observed in HNSC for RNA.
SND1-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10HNSC (9)view →
This table ranks reproducible tumor–normal expression differences for SND1-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SND1-IT1 shows lower tumor expression in KICH and higher tumor expression in HNSC, STAD, COAD, BLCA and BRCA. The HNSC box plot shows higher SND1-IT1 RNA expression in tumor versus normal tissue (log2 FC = +0.080, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleII,III,IV+0.080<.0019view →
STADAllAll+0.513.0025view →
KICHAllAll−0.045.0015view →
COADAllII,III,IV+0.034.0095view →
BLCAFemaleIII,IV+0.131.0433view →
BRCAFemaleAll+0.179.0322view →
Green = repressed in tumor. all 10 lineages →

SND1-IT1-HNSC

Tumor-vs-normal expression box plot for SND1-IT1 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SND1-IT1 in patient tissues and cancer cell lines. In patient samples, SND1-IT1 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set. In cancer cell lines, SND1-IT1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_SCLC, while CRISPR and shRNA rows add functional-dependency signals in UPPER_AERODIGESTIVE_TRACT and NCI60_ALL.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,873THYM (2691)view →
Protein (mass-spec)9,025GBM (2165)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
shRNA
shRNA1,470LUNG_SCLC (287)view →
RNA916UPPER_AERODIGESTIVE_TRACT (163)view →
RNA
Inducing drug5NCI60_ALL (5)view →