SLC5A6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC5A6 mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC5A6-associated genes across cancer lineages are MDFIC2, UBE2QL1, and POU3F4. Each is linked with SLC5A6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC5A6-to-partner and partner-to-SLC5A6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MDFIC2 grouped by SLC5A6-low versus SLC5A6-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A6→partner) and Y-score (partner→SLC5A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINMDFIC2 →+0.155+4.977<.001.00731
LARGE_INTESTINEUBE2QL1 →+0.285+3.766<.001.00431
BLOOD_LymphomaPOU3F4 →+1.280+5.169<.001.00131
BLOOD_LymphomaOR2F1 →+0.146+4.350<.001.00531
BLOOD_LymphomaMYH13 →+0.037+4.191<.001.00731
BLOOD_LymphomaSI →+0.017+4.643<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

MDFIC2 by SLC5A6 expression — SKIN

Box plot of MDFIC2 in SLC5A6-low vs SLC5A6-high samples in SKIN.

Explore this box plot interactively →

Exploration