SLC44A4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC44A4 mutation is significantly associated with the RNA expression of many other genes, with 5,513 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC44A4-associated genes across cancer lineages are RNU7-176P, MIR6070, and MYEOV. Each is linked with SLC44A4 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC44A4-to-partner and partner-to-SLC44A4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC44A4→partner) and Y-score (partner→SLC44A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNU7-176P →+1.327+5.015<.001.00933
LIHCMIR6070 →+0.243+4.293<.001.00932
UCECMYEOV →+1.243+3.169<.001<.00132
LIHCRNU6-391P →+0.299+4.479<.001.00232
CESCST13P14 →+0.049+4.559<.001.00632
UCECRN7SKP264 →+0.130+2.129.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,513 associations by consensus.

Exploration