SEMA3F

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEMA3F RNA expression is significantly associated with the protein abundance of many other proteins, with 16,239 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SEMA3F-associated proteins across cancer lineages are SASH1_S743, DAPK1_S289, and FLT1. Each is linked with SEMA3F in more than 4 cancer types. Because this analysis shows association rather than direction, both SEMA3F-to-partner and partner-to-SEMA3F results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SEMA3F versus SASH1_S743 in BRCA, with a Pearson correlation of -0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SEMA3F→partner) and Y-score (partner→SEMA3F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASASH1_S743 →-0.874-0.890<.001.00535
CCRCCDAPK1_S289 →-0.697-0.784<.001.00135
CCRCCFLT1 →+0.649+0.715<.001<.00135
UCECZNF385A_S160 →+0.707+0.731<.001.00134
CCRCCOLFML2A →+0.713+0.754<.001<.00134
LSCCPTPN7_S149 →-0.500-0.596.002<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,239 associations by consensus.

SEMA3F vs SASH1_S743 — BRCA

Per-sample scatter of SEMA3F vs SASH1_S743 in BRCA (Pearson r = -0.30).

Explore this scatter interactively →

Exploration