SEMA3B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEMA3B RNA expression is significantly associated with the protein abundance of many other proteins, with 12,908 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SEMA3B-associated proteins across cancer lineages are MISP, MSLN, and NCKIPSD_T181. Each is linked with SEMA3B in more than 3 cancer types. Because this analysis shows association rather than direction, both SEMA3B-to-partner and partner-to-SEMA3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SEMA3B versus MISP in UCEC, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SEMA3B→partner) and Y-score (partner→SEMA3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMISP →+0.637+1.247<.001<.00134
LUADMSLN →+0.988+0.877<.001<.00134
GBMNCKIPSD_T181 →+0.367+0.845<.001.00134
BRCADRG1 →-0.305-1.766<.001<.00134
BRCARPL10A →-0.234-2.017<.001<.00134
BRCARPL7A →-0.233-1.082.004.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,908 associations by consensus.

SEMA3B vs MISP — UCEC

Per-sample scatter of SEMA3B vs MISP in UCEC (Pearson r = 0.36).

Explore this scatter interactively →

Exploration