RNU6-90P

Across TCGA patient cohorts, RNU6-90P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,911 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-90P-associated GO terms across cancer lineages are Alternative mRNA splicing, via spliceosome, Regulation of mRNA splicing, via spliceosome, and Vacuolar transport. Each is linked with RNU6-90P in more than 27 cancer types. Because this analysis shows association rather than direction, both RNU6-90P-to-partner and partner-to-RNU6-90P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Alternative mRNA splicing, via spliceosome grouped by RNU6-90P-low versus RNU6-90P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-90P→partner) and Y-score (partner→RNU6-90P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Alternative mRNA splicing, via spliceosome →	+0.068	+0.762	<.001	<.001	3	28
STAD	Regulation of mRNA splicing, via spliceosome →	+0.072	+0.766	<.001	<.001	3	27
STAD	Vacuolar transport →	+0.063	+0.737	<.001	<.001	3	27
STAD	Regulation of RNA splicing →	+0.064	+0.730	<.001	<.001	3	26
STAD	Regulation of mRNA processing →	+0.069	+0.779	<.001	<.001	3	26
STAD	RNA-templated DNA biosynthetic process →	+0.059	+0.702	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,911 associations by consensus.

Alternative mRNA splicing, via spliceosome by RNU6-90P expression — STAD

Explore this box plot interactively →