RNU6-90P

associated omics data
RNA, U6 small nuclear 90, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU6-90P profile across patient tissues and cancer cell-line models. RNU6-90P expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in KICH. Among the 18 cancer types available for tumor–normal comparison, RNU6-90P is differentially expressed in 4, with the highest sampling consensus in UCEC. Additionally, RNU6-90P RNA expression shows 11,920 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight KICH, UCEC, and UVM as cancer lineages where RNU6-90P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU6-90P survival associations across molecular data types. RNU6-90P RNA expression shows survival associations in the most cancer types (21). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU6-90P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21KICH (65)view →
This table ranks reproducible RNU6-90P RNA expression–survival associations across cancer types. High RNU6-90P expression shows unfavorable associations in KICH, OV, COAD and CHOL, but favorable associations in BRCA and CESC. The KICH Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KICH as the clearest survival context for RNU6-90P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KICHDFSQuartileII,III,IV0.3940.894<.00165view →
BRCADFSQuartileIII,IV0.9040.738.00237view →
OVOSMedianAll0.2810.356.00730view →
COADOSTertileIV0.2430.607.01426view →
CESCOSTertileIV0.8970.374.00824view →
CHOLDFSMedianIII,IV0.1270.647.00621view →
Pink = unfavorable, green = favorable. all 21 lineages →

RNU6-90P-KICH (DFS)

Kaplan–Meier survival curve for RNU6-90P RNA expression in KICH: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes RNU6-90P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 4. The strongest signals are observed in LUSC for RNA.
RNU6-90P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot4LUSC (2)view →
This table ranks reproducible tumor–normal expression differences for RNU6-90P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU6-90P shows lower tumor expression in READ and LUSC and higher tumor expression in UCEC and LIHC. The UCEC box plot shows higher RNU6-90P RNA expression in tumor versus normal tissue (log2 FC = +1.010, t-test p = .021).
LineageGenderStageFold-changepSampling consensus
UCECAllIV+1.010.0212view →
READAllAll−0.476.0052view →
LUSCAllAll−0.338.0112view →
LIHCMaleAll+0.209.0052view →
Green = repressed in tumor. all 4 lineages →

RNU6-90P-UCEC

Tumor-vs-normal expression box plot for RNU6-90P in UCEC.

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Cross-omics associations

This table shows molecular features associated with RNU6-90P in patient tissues and cancer cell lines. In patient samples, RNU6-90P shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,920UVM (4871)view →
Function (RNA)6,911STAD (5537)view →