RNU6-542P

Across TCGA patient cohorts, RNU6-542P RNA expression is significantly associated with the RNA expression of many other genes, with 7,474 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible RNU6-542P-associated genes across cancer lineages are SRRM1P3, BIRC6-AS2, and MIR554. Each is linked with RNU6-542P in more than 12 cancer types. Because this analysis shows association rather than direction, both RNU6-542P-to-partner and partner-to-RNU6-542P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU6-542P versus SRRM1P3 in UCEC, with a Pearson correlation of 0.64.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-542P→partner) and Y-score (partner→RNU6-542P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SRRM1P3 →	+0.517	+0.093	<.001	.002	3	13
UCEC	BIRC6-AS2 →	+0.711	+0.123	<.001	.003	3	12
COAD	MIR554 →	+1.698	+0.075	<.001	.001	3	12
KIRP	LINC00894 →	+1.019	+0.090	<.001	.002	3	11
BRCA	MKRN5P →	+0.585	+0.102	<.001	.002	3	11
BRCA	TTC3-AS1 →	+0.605	+0.061	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,474 associations by consensus.

RNU6-542P vs SRRM1P3 — UCEC

Explore this scatter interactively →