RNU1-88P

associated omics data
RNA, U1 small nuclear 88, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU1-88P profile across patient tissues and cancer cell-line models. RNU1-88P expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, RNU1-88P is differentially expressed in 5, with the highest sampling consensus in BRCA. Additionally, RNU1-88P RNA expression shows 6,138 significant pathway-activity associations, with the highest sampling consensus in STAD. Together, these results highlight BRCA, and STAD as cancer lineages where RNU1-88P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU1-88P survival associations across molecular data types. RNU1-88P RNA expression shows survival associations in the most cancer types (14). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU1-88P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14BRCA (51)view →
This table ranks reproducible RNU1-88P RNA expression–survival associations across cancer types. High RNU1-88P expression shows unfavorable associations in BRCA, ACC, LIHC and KIRC, but favorable associations in HNSC and SKCM. The BRCA Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .006). Together, the overview and detailed table identify BRCA as the clearest survival context for RNU1-88P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCADFSTertileII,III,IV0.8330.901.00651view →
ACCDFSTertileII,III,IV0.1780.566.00948view →
LIHCOSTertileAll0.5190.712.00145view →
HNSCDFSTertileIV0.5030.281.00739view →
KIRCOSTertileII,III,IV0.3570.568.00238view →
SKCMOSTertileIII,IV0.8310.670.02021view →
Pink = unfavorable, green = favorable. all 14 lineages →

RNU1-88P-BRCA (DFS)

Kaplan–Meier survival curve for RNU1-88P RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU1-88P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5. The strongest signals are observed in BRCA for RNA.
RNU1-88P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5BRCA (4)view →
This table ranks reproducible tumor–normal expression differences for RNU1-88P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU1-88P shows higher tumor expression in BRCA, UCEC, LUSC, CHOL and LUAD. The BRCA box plot shows higher RNU1-88P RNA expression in tumor versus normal tissue (log2 FC = +0.332, t-test p = .025).
LineageGenderStageFold-changepSampling consensus
BRCAFemaleAll+0.332.0254view →
UCECAllIV+0.880.0242view →
LUSCAllAll+0.124.0152view →
CHOLAllAll+0.418.0361view →
LUADFemaleII,III,IV+0.200.0341view →
Green = repressed in tumor. all 5 lineages →

RNU1-88P-BRCA

Tumor-vs-normal expression box plot for RNU1-88P in BRCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RNU1-88P in patient tissues and cancer cell lines. In patient samples, RNU1-88P shows the broadest associations at the RNA and protein expression levels, with STAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,138STAD (4661)view →
Protein (mass-spec)4,844UCEC (985)view →