RNF126

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF126 mutation is significantly associated with the RNA expression of many other genes, with 356 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF126-associated genes across cancer lineages are USP9YP10, RNU6-794P, and LINC01810. Each is linked with RNF126 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF126-to-partner and partner-to-RNF126 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USP9YP10 grouped by RNF126-low versus RNF126-high in LGG.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF126→partner) and Y-score (partner→RNF126) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGUSP9YP10 →+0.049+7.977<.001.00732
SKCMRNU6-794P →+0.484+6.219<.001<.00132
BLCALINC01810 →+0.109+7.640<.001.00932
COADSNRPCP15 →+0.183+4.807<.001.00432
COADMIR4692 →+1.229+4.515<.001.00232
LUSCCXorf49B →+0.044+4.392.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 356 associations by consensus.

USP9YP10 by RNF126 expression — LGG

Box plot of USP9YP10 in RNF126-low vs RNF126-high samples in LGG.

Explore this box plot interactively →

Exploration