RCC1L

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RCC1L protein abundance is significantly associated with the RNA expression of many other genes, with 11,464 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RCC1L-associated genes across cancer lineages are GIMAP7, FLT3, and MNDA. Each is linked with RCC1L in more than 6 cancer types. Because this analysis shows association rather than direction, both RCC1L-to-partner and partner-to-RCC1L results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RCC1L versus GIMAP7 in HNSC, with a Pearson correlation of -0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RCC1L→partner) and Y-score (partner→RCC1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCGIMAP7 →-0.893-0.194<.001<.00137
HNSCFLT3 →-0.689-0.241<.001<.00136
COADMNDA →-1.116-0.334<.001<.00136
COADLRRK2 →-0.832-0.285<.001<.00135
COADNSUN5P1 →+0.690+0.275<.001<.00135
OVFAM78A →-0.712-0.400.002.00426
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,464 associations by consensus.

RCC1L vs GIMAP7 — HNSC

Per-sample scatter of RCC1L vs GIMAP7 in HNSC (Pearson r = -0.32).

Explore this scatter interactively →

Exploration