RAX2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAX2 mutation is significantly associated with the RNA expression of many other genes, with 20 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAX2-associated genes across cancer lineages are MIR4465, ELOCP14, and RNU7-88P. Each is linked with RAX2 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAX2-to-partner and partner-to-RAX2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4465 grouped by RAX2-low versus RAX2-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAX2→partner) and Y-score (partner→RAX2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAMIR4465 →+0.311+7.640<.001.00931
COADELOCP14 →+0.139+7.741<.001.00931
COADRNU7-88P →+0.533+7.741<.001.00931
UCECRN7SL386P →+0.226+4.184.002.00331
UCECRNA5SP414 →+1.017+3.840<.001.00731
BLCADEFB107B →+0.074+7.640<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

MIR4465 by RAX2 expression — BLCA

Box plot of MIR4465 in RAX2-low vs RAX2-high samples in BLCA.

Explore this box plot interactively →

Exploration