RAB39B

Across TCGA patient cohorts, RAB39B mutation is significantly associated with the RNA expression of many other genes, with 3,064 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAB39B-associated genes across cancer lineages are RNU1-24P, ARHGAP42P3, and RNA5SP467. Each is linked with RAB39B in more than 2 cancer types. Because this analysis shows association rather than direction, both RAB39B-to-partner and partner-to-RAB39B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU1-24P grouped by RAB39B-low versus RAB39B-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB39B→partner) and Y-score (partner→RAB39B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	RNU1-24P →	+0.188	+4.314	<.001	.009	3	3
SKCM	ARHGAP42P3 →	+0.011	+5.039	<.001	.003	3	2
COAD	RNA5SP467 →	+0.369	+4.374	<.001	.002	3	2
PRAD	LINC01784 →	+0.104	+7.939	<.001	.008	3	2
BRCA	ATP5F1AP8 →	+0.036	+5.020	<.001	.009	3	2
BLCA	BRD7P1 →	+0.031	+4.017	.001	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,064 associations by consensus.

RNU1-24P by RAB39B expression — BLCA

Explore this box plot interactively →