RAB38

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB38 protein abundance is significantly associated with the RNA expression of many other genes, with 10,594 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RAB38-associated genes across cancer lineages are ANXA1, S100A14, and ABCA12. Each is linked with RAB38 in more than 4 cancer types. Because this analysis shows association rather than direction, both RAB38-to-partner and partner-to-RAB38 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB38 versus ANXA1 in HNSC, with a Pearson correlation of 0.24.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB38→partner) and Y-score (partner→RAB38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCANXA1 →+1.158+0.574.006.00135
LSCCS100A14 →+1.678+0.798<.001<.00134
CCRCCABCA12 →+1.154+0.390<.001<.00134
HNSCCASP4 →+0.730+0.662<.001<.00134
LSCCN4BP1 →+0.470+0.750<.001<.00133
CCRCCPIP5K1B →-0.928-0.549<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,594 associations by consensus.

RAB38 vs ANXA1 — HNSC

Per-sample scatter of RAB38 vs ANXA1 in HNSC (Pearson r = 0.24).

Explore this scatter interactively →

Exploration