PIGB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGB protein abundance is significantly associated with the RNA expression of many other genes, with 1,638 significant associations in total. OV shows the largest number of these associations.

The most reproducible PIGB-associated genes across cancer lineages are SLC17A7, RNU6-933P, and NYNRIN. Each is linked with PIGB in more than 1 cancer types. Because this analysis shows association rather than direction, both PIGB-to-partner and partner-to-PIGB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PIGB versus SLC17A7 in PDAC, with a Pearson correlation of -0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGB→partner) and Y-score (partner→PIGB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSLC17A7 →-0.101-0.490.001.00332
LUADRNU6-933P →-1.887-0.397.002.00132
OVNYNRIN →-1.528-0.587<.001.00132
CCRCCSCTR →+1.426+0.663.004.00232
PDACLINC02477 →+0.376+0.705<.001<.00132
LUADCASP6 →+0.605+0.245.003.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,638 associations by consensus.

PIGB vs SLC17A7 — PDAC

Per-sample scatter of PIGB vs SLC17A7 in PDAC (Pearson r = -0.44).

Explore this scatter interactively →

Exploration