PHF5GP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PHF5GP RNA expression is significantly associated with the protein abundance of many other proteins, with 8,468 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PHF5GP-associated proteins across cancer lineages are STK39, STK39_S385, and STK39_T354. Each is linked with PHF5GP in more than 6 cancer types. Because this analysis shows association rather than direction, both PHF5GP-to-partner and partner-to-PHF5GP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PHF5GP versus STK39 in CCRCC, with a Pearson correlation of 0.63.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PHF5GP→partner) and Y-score (partner→PHF5GP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCSTK39 →+0.585+1.133<.001<.00137
CCRCCSTK39_S385 →+0.729+1.010<.001<.00136
CCRCCSTK39_T354 →+0.685+0.851<.001<.00135
GBMRANBP3 →+0.255+0.490<.001<.00134
LUADSTK39_S371 →+0.822+1.244<.001<.00134
LUADFKBP11 →-0.641-0.975<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,468 associations by consensus.

PHF5GP vs STK39 — CCRCC

Per-sample scatter of PHF5GP vs STK39 in CCRCC (Pearson r = 0.63).

Explore this scatter interactively →

Exploration