PENK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PENK protein abundance is significantly associated with the RNA expression of many other genes, with 4,381 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PENK-associated genes across cancer lineages are UTS2R, RNU6-1200P, and OR10AH1P. Each is linked with PENK in more than 1 cancer types. Because this analysis shows association rather than direction, both PENK-to-partner and partner-to-PENK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PENK versus UTS2R in PDAC, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PENK→partner) and Y-score (partner→PENK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACUTS2R →+0.166+0.694.009.00332
PDACRNU6-1200P →+1.157+0.635.001.00832
GBMOR10AH1P →+0.137+0.726<.001<.00132
LSCCPLCB4 →+2.672+2.155<.001.00932
LSCCPAK5 →+1.767+2.427.007.00832
LSCCRCL1 →+0.690+2.842.005.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,381 associations by consensus.

PENK vs UTS2R — PDAC

Per-sample scatter of PENK vs UTS2R in PDAC (Pearson r = 0.61).

Explore this scatter interactively →

Exploration