OBI1-AS1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OBI1-AS1 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OBI1-AS1-associated genes across cancer lineages are SNORD114-18, CDKN2AIPNLP3, and RPL9P13. Each is linked with OBI1-AS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both OBI1-AS1-to-partner and partner-to-OBI1-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD114-18 grouped by OBI1-AS1-low versus OBI1-AS1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OBI1-AS1→partner) and Y-score (partner→OBI1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNORD114-18 →+0.865+5.299<.001.00631
UCECCDKN2AIPNLP3 →+0.273+5.852<.001.00331
UCECRPL9P13 →+0.179+5.621.004.00431
UCECTEMN3-AS1 →+1.102+5.551<.001.00431
UCECRNU6-358P →+1.044+5.133<.001.00831
UCECMETTL7AP1 →+0.107+5.358.007.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

SNORD114-18 by OBI1-AS1 expression — UCEC

Box plot of SNORD114-18 in OBI1-AS1-low vs OBI1-AS1-high samples in UCEC.

Explore this box plot interactively →

Exploration