NIFKP6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NIFKP6 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,038 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NIFKP6-associated proteins across cancer lineages are RFC1_T506, TOP2A, and USP39. Each is linked with NIFKP6 in more than 3 cancer types. Because this analysis shows association rather than direction, both NIFKP6-to-partner and partner-to-NIFKP6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NIFKP6 versus RFC1_T506 in GBM, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NIFKP6→partner) and Y-score (partner→NIFKP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRFC1_T506 →+0.775+0.179<.001<.00134
GBMTOP2A →+0.802+0.276<.001<.00134
GBMUSP39 →+0.235+0.161<.001<.00134
UCECCDK12_S1083 →+0.312+0.772<.001.00434
BRCACMSS1 →+0.334+0.090.004.00734
LSCCCRNKL1 →+0.250+0.229.003<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,038 associations by consensus.

NIFKP6 vs RFC1_T506 — GBM

Per-sample scatter of NIFKP6 vs RFC1_T506 in GBM (Pearson r = 0.47).

Explore this scatter interactively →

Exploration