NELFA

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NELFA protein abundance is significantly associated with the RNA expression of many other genes, with 16,749 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NELFA-associated genes across cancer lineages are ZNF141, HAUS3, and RFC5. Each is linked with NELFA in more than 7 cancer types. Because this analysis shows association rather than direction, both NELFA-to-partner and partner-to-NELFA results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NELFA→partner) and Y-score (partner→NELFA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZNF141 →+0.527+0.204<.001<.00138
GBMHAUS3 →+0.424+0.293<.001<.00138
LSCCRFC5 →+0.633+0.205<.001<.00137
BRCAMBTD1 →+0.630+0.220<.001<.00128
HNSCDCAF16 →+0.976+0.317<.001<.00137
HNSCMSL2 →+0.631+0.216.009<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,749 associations by consensus.

Exploration