MSC-AS1

Across TCGA patient cohorts, MSC-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,003 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible MSC-AS1-associated proteins across cancer lineages are RIPOR1, C1R, and TIMP2. Each is linked with MSC-AS1 in more than 8 cancer types. Because this analysis shows association rather than direction, both MSC-AS1-to-partner and partner-to-MSC-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MSC-AS1 versus RIPOR1 in OV, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MSC-AS1→partner) and Y-score (partner→MSC-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	RIPOR1 →	+0.301	+0.419	<.001	<.001	3	9
OV	C1R →	+0.616	+0.488	<.001	<.001	3	9
BRCA	TIMP2 →	+0.790	+0.332	<.001	<.001	3	8
OV	TUBB6 →	+0.527	+0.506	<.001	<.001	3	8
UCEC	PALLD →	+0.974	+0.791	<.001	<.001	3	8
OV	ITGA5 →	+0.716	+0.577	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,003 associations by consensus.

MSC-AS1 vs RIPOR1 — OV

Explore this scatter interactively →