LINC02428

Across TCGA patient cohorts, LINC02428 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,335 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02428-associated proteins across cancer lineages are IGF2BP3_S184, XPO5, and TOP2A. Each is linked with LINC02428 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02428-to-partner and partner-to-LINC02428 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02428 versus IGF2BP3_S184 in LUAD, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02428→partner) and Y-score (partner→LINC02428) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	IGF2BP3_S184 →	+2.085	+0.500	.002	.002	3	5
LSCC	XPO5 →	+0.450	+0.739	.001	<.001	3	4
LSCC	TOP2A →	+0.678	+0.785	<.001	<.001	3	4
HNSC	NUP153_T699 →	+0.773	+1.422	<.001	<.001	3	4
LSCC	AHCTF1 →	+0.169	+0.700	<.001	.004	3	4
OV	DNMT3A →	+0.665	+0.790	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,335 associations by consensus.

LINC02428 vs IGF2BP3_S184 — LUAD

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