LINC00652

Across TCGA patient cohorts, LINC00652 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00652-associated genes across cancer lineages are MIR4510, MIR3692, and MIR6780B. Each is linked with LINC00652 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00652-to-partner and partner-to-LINC00652 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4510 grouped by LINC00652-low versus LINC00652-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00652→partner) and Y-score (partner→LINC00652) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR4510 →	+0.361	+4.868	<.001	.004	3	1
UCEC	MIR3692 →	+0.418	+5.292	.004	.002	3	1
UCEC	MIR6780B →	+0.615	+4.474	<.001	.002	3	1
UCEC	MIR345 →	+0.549	+4.202	.008	.004	3	1
UCEC	RNU6-961P →	+0.300	+6.475	<.001	<.001	3	1
UCEC	MIR574 →	+0.702	+4.148	.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

MIR4510 by LINC00652 expression — UCEC

Explore this box plot interactively →