LINC00638

Across TCGA patient cohorts, LINC00638 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,627 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC00638-associated proteins across cancer lineages are MTA1, SUPT16H, and SSRP1. Each is linked with LINC00638 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC00638-to-partner and partner-to-LINC00638 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00638 versus MTA1 in GBM, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00638→partner) and Y-score (partner→LINC00638) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MTA1 →	+0.358	+0.472	.001	<.001	3	8
GBM	SUPT16H →	+0.412	+0.431	<.001	<.001	3	7
LSCC	SSRP1 →	+0.420	+0.518	<.001	<.001	3	6
GBM	PPP4R3A →	+0.239	+0.362	.002	.002	2	6
GBM	ZNF830 →	+0.411	+0.526	<.001	<.001	3	5
LSCC	WDR89 →	+0.227	+0.412	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,627 associations by consensus.

LINC00638 vs MTA1 — GBM

Explore this scatter interactively →