LINC00494

Across TCGA patient cohorts, LINC00494 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,027 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00494-associated proteins across cancer lineages are SEPTIN1, DOCK8, and LSP1. Each is linked with LINC00494 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC00494-to-partner and partner-to-LINC00494 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00494 versus SEPTIN1 in HNSC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00494→partner) and Y-score (partner→LINC00494) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SEPTIN1 →	+0.911	+0.422	<.001	.004	3	6
UCEC	DOCK8 →	+0.550	+0.637	<.001	.001	3	6
LSCC	LSP1 →	+0.625	+0.544	<.001	<.001	3	6
HNSC	PRKCB →	+0.867	+0.634	<.001	<.001	3	5
LSCC	PTPN6 →	+0.586	+0.529	<.001	<.001	3	5
LSCC	PTPN7_S149 →	+0.633	+0.316	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,027 associations by consensus.

LINC00494 vs SEPTIN1 — HNSC

Explore this scatter interactively →