LINC00221

Across TCGA patient cohorts, LINC00221 RNA expression is significantly associated with the RNA expression of many other genes, with 10,084 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00221-associated genes across cancer lineages are LINC01194, HOMER2P1, and MAGEC1. Each is linked with LINC00221 in more than 21 cancer types. Because this analysis shows association rather than direction, both LINC00221-to-partner and partner-to-LINC00221 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00221 versus LINC01194 in SKCM, with a Pearson correlation of 0.64.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00221→partner) and Y-score (partner→LINC00221) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	LINC01194 →	+1.051	+2.208	<.001	<.001	3	22
TGCT	HOMER2P1 →	+2.858	+2.349	<.001	<.001	3	21
SKCM	MAGEC1 →	+2.628	+1.974	<.001	<.001	3	18
TGCT	IGHV3-47 →	+1.401	+1.658	<.001	<.001	3	18
TGCT	MIR548XHG →	+2.888	+2.197	<.001	<.001	3	18
ESCA	LINC02327 →	+0.749	+0.768	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,084 associations by consensus.

LINC00221 vs LINC01194 — SKCM

Explore this scatter interactively →