LINC-PINT

Across TCGA patient cohorts, LINC-PINT RNA expression is significantly associated with the protein abundance of many other proteins, with 14,939 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC-PINT-associated proteins across cancer lineages are RPL12_S38, ARHGEF6, and MCM4_S120. Each is linked with LINC-PINT in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC-PINT-to-partner and partner-to-LINC-PINT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC-PINT versus RPL12_S38 in LSCC, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC-PINT→partner) and Y-score (partner→LINC-PINT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RPL12_S38 →	-0.974	-0.497	<.001	<.001	3	5
UCEC	ARHGEF6 →	+0.390	+0.913	<.001	<.001	3	5
LUAD	MCM4_S120 →	-1.090	-0.494	.004	.006	2	6
HNSC	GAN →	-0.590	-0.750	<.001	<.001	3	5
UCEC	RRM2 →	-0.630	-0.735	.003	.004	3	4
HNSC	SNX2 →	+0.303	+0.678	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,939 associations by consensus.

LINC-PINT vs RPL12_S38 — LSCC

Explore this scatter interactively →