LARP4P

Across TCGA patient cohorts, LARP4P RNA expression is significantly associated with the protein abundance of many other proteins, with 12,711 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LARP4P-associated proteins across cancer lineages are SMC5, CTDSPL2, and SRRT. Each is linked with LARP4P in more than 5 cancer types. Because this analysis shows association rather than direction, both LARP4P-to-partner and partner-to-LARP4P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LARP4P versus SMC5 in LSCC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LARP4P→partner) and Y-score (partner→LARP4P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SMC5 →	+0.265	+0.627	.001	<.001	3	6
GBM	CTDSPL2 →	+0.425	+0.330	<.001	<.001	3	6
GBM	SRRT →	+0.298	+0.404	<.001	<.001	3	5
GBM	PARP4 →	-0.523	-0.420	<.001	<.001	3	5
GBM	USP39 →	+0.235	+0.307	<.001	<.001	3	5
GBM	RTF1 →	+0.342	+0.447	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,711 associations by consensus.

LARP4P vs SMC5 — LSCC

Explore this scatter interactively →