KRTAP5-6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRTAP5-6 mutation is significantly associated with the RNA expression of many other genes, with 64 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible KRTAP5-6-associated genes across cancer lineages are RN7SL726P, MIR6736, and UQCRBP2. Each is linked with KRTAP5-6 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP5-6-to-partner and partner-to-KRTAP5-6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP5-6→partner) and Y-score (partner→KRTAP5-6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL726P →+0.225+3.488<.001<.00131
SKCMMIR6736 →+0.469+2.855<.001.00931
COADUQCRBP2 →+0.196+4.321<.001.00231
COADTBC1D26-AS1 →+0.195+4.624<.001.00131
COADKIF3AP1 →+0.389+3.754<.001.00831
COADBCAS2P1 →+0.315+3.951<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 64 associations by consensus.

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