KLHL29

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHL29 protein abundance is significantly associated with the RNA expression of many other genes, with 6,414 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KLHL29-associated genes across cancer lineages are OGN, SOGA1, and GSTM3P2. Each is linked with KLHL29 in more than 2 cancer types. Because this analysis shows association rather than direction, both KLHL29-to-partner and partner-to-KLHL29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLHL29 versus OGN in UCEC, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHL29→partner) and Y-score (partner→KLHL29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOGN →+1.136+0.531<.001<.00133
HNSCSOGA1 →+0.909+0.469.001.00533
HNSCGSTM3P2 →+0.845+0.621.002.00333
GBMLINC00327 →+0.466+0.361.003.00533
GBMTSPAN18-AS1 →+0.857+0.409<.001.00733
GBMLINC02538 →+0.429+0.590.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,414 associations by consensus.

KLHL29 vs OGN — UCEC

Per-sample scatter of KLHL29 vs OGN in UCEC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration