KCNT1

Across TCGA patient cohorts, KCNT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,584 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KCNT1-associated proteins across cancer lineages are PCMT1, TUBB4A, and PMM2. Each is linked with KCNT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both KCNT1-to-partner and partner-to-KCNT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNT1 versus PCMT1 in GBM, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNT1→partner) and Y-score (partner→KCNT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PCMT1 →	+0.324	+0.655	<.001	<.001	3	3
UCEC	TUBB4A →	+1.220	+0.332	<.001	.003	3	3
GBM	PMM2 →	-0.502	-1.126	<.001	<.001	3	3
HNSC	PPP1R12B →	+0.602	+0.184	<.001	<.001	3	3
PDAC	VCAN_S2116 →	+0.848	+0.127	.005	.001	3	3
PDAC	TMEM214 →	-0.357	-0.117	.002	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,584 associations by consensus.

KCNT1 vs PCMT1 — GBM

Explore this scatter interactively →