KCNH1-IT1

associated omics data
KCNH1 intronic transcript 1Genealiases: []

Q-omics provides the consensus-scored KCNH1-IT1 profile across patient tissues and cancer cell-line models. KCNH1-IT1 expression is associated with patient survival in 17 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, KCNH1-IT1 is differentially expressed in 9, with the highest sampling consensus in BRCA. Additionally, KCNH1-IT1 RNA expression shows 10,407 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight KIRC, BRCA, and TGCT as cancer lineages where KCNH1-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes KCNH1-IT1 survival associations across molecular data types. KCNH1-IT1 RNA expression shows survival associations in the most cancer types (17). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
KCNH1-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier17KIRC (198)view →
This table ranks reproducible KCNH1-IT1 RNA expression–survival associations across cancer types. High KCNH1-IT1 expression shows unfavorable associations in KIRC, MESO, KIRP, BLCA and LIHC, but favorable associations in BRCA. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for KCNH1-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSTertileAll0.4900.672<.001198view →
BRCAOSTertileAll0.9830.944<.001121view →
MESOOSQuartileAll0.2510.441.00778view →
KIRPDFSTertileAll0.8230.935.00167view →
BLCADFSTertileAll0.1640.381.00160view →
LIHCDFSTertileII,III,IV0.1070.484<.00154view →
Pink = unfavorable, green = favorable. all 17 lineages →

KCNH1-IT1-KIRC (OS)

Kaplan–Meier survival curve for KCNH1-IT1 RNA expression in KIRC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes KCNH1-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in BRCA for RNA.
KCNH1-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9BRCA (8)view →
This table ranks reproducible tumor–normal expression differences for KCNH1-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. KCNH1-IT1 shows lower tumor expression in KIRC and COAD and higher tumor expression in BRCA, HNSC, LUSC and THCA. The BRCA box plot shows higher KCNH1-IT1 RNA expression in tumor versus normal tissue (log2 FC = +0.801, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BRCAAllAll+0.801<.0018view →
HNSCAllII,III,IV+0.314.0038view →
KIRCMaleII,III,IV−0.291<.0018view →
LUSCAllAll+0.555<.0016view →
COADFemaleII,III,IV−0.181.0016view →
THCAMaleAll+0.114<.0014view →
Green = repressed in tumor. all 9 lineages →

KCNH1-IT1-BRCA

Tumor-vs-normal expression box plot for KCNH1-IT1 in BRCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with KCNH1-IT1 in patient tissues and cancer cell lines. In patient samples, KCNH1-IT1 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA10,407TGCT (2912)view →
Protein (mass-spec)10,060LSCC (3552)view →