KCNC3

associated omics data
potassium voltage-gated channel subfamily C member 3Genealiases: KSHIIID · KV3.3 · SCA13

Q-omics provides the consensus-scored KCNC3 profile across patient tissues and cancer cell-line models. KCNC3 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, KCNC3 is differentially expressed in 13, with the highest sampling consensus in BLCA. Additionally, KCNC3 RNA expression shows 18,111 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight KIRP, BLCA, and THYM as cancer lineages where KCNC3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes KCNC3 survival associations across molecular data types. KCNC3 RNA expression shows survival associations in the most cancer types (24), followed by mutation status (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
KCNC3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24KIRP (103)view →
MutationKaplan–Meier6ESCA (40)view →
This table ranks reproducible KCNC3 RNA expression–survival associations across cancer types. High KCNC3 expression shows unfavorable associations in KIRP, COAD and LAML, but favorable associations in HNSC, CESC and PAAD. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for KCNC3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSMedianAll0.3710.719<.001103view →
HNSCDFSMedianIV0.7280.554<.001101view →
COADDFSQuartileAll0.4160.709<.00197view →
CESCOSTertileIII,IV0.9420.595.00338view →
PAADDFSMedianAll0.3860.194<.00133view →
LAMLDFSMedianAll0.4410.691.01624view →
Pink = unfavorable, green = favorable. all 24 lineages →

KCNC3-KIRP (DFS)

Kaplan–Meier survival curve for KCNC3 RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes KCNC3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 1. The strongest signals are observed in BLCA for RNA and CCRCC for protein.
KCNC3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13BLCA (10)view →
Protein (mass-spec)Box plot1CCRCC (2)view →
This table ranks reproducible tumor–normal expression differences for KCNC3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. KCNC3 shows lower tumor expression in KICH and higher tumor expression in BLCA, COAD, LIHC, HNSC and STAD. The BLCA box plot shows higher KCNC3 RNA expression in tumor versus normal tissue (log2 FC = +1.023, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAAllIII,IV+1.023<.00110view →
KICHMaleAll−2.024<.0019view →
COADAllIV+0.568<.0019view →
LIHCAllII,III,IV+0.810<.0018view →
HNSCMaleAll+0.641<.0018view →
STADAllII,III,IV+1.068<.0017view →
Green = repressed in tumor. all 13 lineages →

KCNC3-BLCA

Tumor-vs-normal expression box plot for KCNC3 in BLCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with KCNC3 in patient tissues and cancer cell lines. In patient samples, KCNC3 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set. In cancer cell lines, KCNC3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in CNS, while CRISPR and shRNA rows add functional-dependency signals in BREAST and SOFT_TISSUE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA18,111THYM (7171)view →
Protein (mass-spec)10,329GBM (3184)view →
Protein (mass-spec)
Protein (mass-spec)3,111GBM (1994)view →
RNA705UCEC (608)view →
Mutation
RNA1,865UCEC (1626)view →
Protein (RPPA)42UCEC (32)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,160CNS (195)view →
RNA1,838BREAST (288)view →
RNA
RNA10,268SOFT_TISSUE (3874)view →
Function (RNA)4,055SOFT_TISSUE (1262)view →
shRNA
RNA2,661KIDNEY (545)view →
shRNA2,134BREAST (248)view →
Mutation
Mutation951LARGE_INTESTINE (454)view →
RNA19BLOOD_Leukemia (10)view →