IQCC

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IQCC RNA expression is significantly associated with the protein abundance of many other proteins, with 13,260 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IQCC-associated proteins across cancer lineages are VEZF1, KHDRBS1_S58, and RPA2. Each is linked with IQCC in more than 5 cancer types. Because this analysis shows association rather than direction, both IQCC-to-partner and partner-to-IQCC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IQCC versus VEZF1 in BRCA, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IQCC→partner) and Y-score (partner→IQCC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAVEZF1 →+0.499+0.599<.001<.00136
PDACKHDRBS1_S58 →+0.431+0.370.002<.00136
GBMRPA2 →+0.356+0.597<.001<.00136
HNSCZMYM3 →+0.353+0.466<.001.00235
GBMZMYM4 →+0.275+0.311<.001<.00135
LUADRCC1 →+0.431+0.606<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,260 associations by consensus.

IQCC vs VEZF1 — BRCA

Per-sample scatter of IQCC vs VEZF1 in BRCA (Pearson r = 0.39).

Explore this scatter interactively →

Exploration