IGKV7-3

associated omics data
immunoglobulin kappa variable 7-3 (pseudogene)Genealiases: B1 · IGKV73

Q-omics provides the consensus-scored IGKV7-3 profile across patient tissues and cancer cell-line models. IGKV7-3 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV7-3 is differentially expressed in 8, with the highest sampling consensus in COAD. Additionally, IGKV7-3 RNA expression shows 6,994 significant pathway-activity associations, with the highest sampling consensus in HNSC. Together, these results highlight HNSC, and COAD as cancer lineages where IGKV7-3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV7-3 survival associations across molecular data types. IGKV7-3 RNA expression shows survival associations in the most cancer types (23). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV7-3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23HNSC (130)view →
This table ranks reproducible IGKV7-3 RNA expression–survival associations across cancer types. High IGKV7-3 expression shows unfavorable associations in OV, UVM and THYM, but favorable associations in HNSC, SKCM and LUAD. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV7-3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSTertileAll0.7720.638<.001130view →
OVOSTertileAll0.7810.865.00592view →
UVMOSTertileAll0.3310.863<.00190view →
THYMDFSTertileIII,IV0.3170.913<.00153view →
SKCMOSMedianAll0.9390.801<.00151view →
LUADDFSMedianAll0.8300.749.00332view →
Pink = unfavorable, green = favorable. all 23 lineages →

IGKV7-3-HNSC (DFS)

Kaplan–Meier survival curve for IGKV7-3 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGKV7-3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in COAD for RNA.
IGKV7-3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8COAD (7)view →
This table ranks reproducible tumor–normal expression differences for IGKV7-3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV7-3 shows lower tumor expression in COAD, BRCA, KIRP and READ and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGKV7-3 RNA expression in normal versus tumor tissue (log2 FC = −0.906, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADAllAll−0.906<.0017view →
LUADFemaleAll+0.926<.0016view →
KIRCAllAll+0.225.0015view →
BRCAFemaleAll−0.353<.0014view →
KIRPAllAll−0.239.0333view →
READAllAll−1.181.0082view →
Green = repressed in tumor. all 8 lineages →

IGKV7-3-COAD

Tumor-vs-normal expression box plot for IGKV7-3 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGKV7-3 in patient tissues and cancer cell lines. In patient samples, IGKV7-3 shows the broadest associations at the RNA and protein expression levels, with HNSC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,994HNSC (3808)view →
RNA6,933TGCT (2621)view →