IGKV6-21

associated omics data
immunoglobulin kappa variable 6-21 (non-functional)Genealiases: A26 · IGKV621

Q-omics provides the consensus-scored IGKV6-21 profile across patient tissues and cancer cell-line models. IGKV6-21 expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV6-21 is differentially expressed in 7, with the highest sampling consensus in COAD. Additionally, IGKV6-21 RNA expression shows 8,620 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight HNSC, COAD, and LSCC as cancer lineages where IGKV6-21 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV6-21 survival associations across molecular data types. IGKV6-21 RNA expression shows survival associations in the most cancer types (22), followed by mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV6-21 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22HNSC (149)view →
Protein (mass-spec)Kaplan–Meier4LUAD (37)view →
This table ranks reproducible IGKV6-21 RNA expression–survival associations across cancer types. High IGKV6-21 expression shows favorable associations in HNSC, UCEC, SKCM, BRCA, COAD and MESO. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV6-21 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.3970.264<.001149view →
UCECDFSMedianIII,IV0.7000.412<.00190view →
SKCMOSMedianAll0.8870.651<.00184view →
BRCAOSTertileAll0.6120.531<.00171view →
COADDFSMedianII,III,IV0.7850.583.00250view →
MESOOSQuartileAll0.7680.165.00629view →
Pink = unfavorable, green = favorable. all 22 lineages →

IGKV6-21-HNSC (DFS)

Kaplan–Meier survival curve for IGKV6-21 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV6-21 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7, while mass-spec protein shows differences in 4. The strongest signals are observed in COAD for RNA and HNSC for protein.
IGKV6-21 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7COAD (11)view →
Protein (mass-spec)Box plot4HNSC (8)view →
This table ranks reproducible tumor–normal expression differences for IGKV6-21. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV6-21 shows lower tumor expression in COAD, BRCA, LIHC and READ and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGKV6-21 RNA expression in normal versus tumor tissue (log2 FC = −4.164, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−4.164<.00111view →
LUADFemaleAll+2.084<.0017view →
BRCAFemaleAll−1.181<.0016view →
KIRCMaleAll+1.181<.0014view →
LIHCFemaleII,III,IV−0.823.0114view →
READAllAll−3.526<.0013view →
Green = repressed in tumor. all 7 lineages →

IGKV6-21-COAD

Tumor-vs-normal expression box plot for IGKV6-21 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGKV6-21 in patient tissues and cancer cell lines. In patient samples, IGKV6-21 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)8,620LSCC (3585)view →
RNA8,344TGCT (2974)view →
Protein (mass-spec)
Protein (mass-spec)8,311BRCA (3097)view →
RNA4,983LSCC (2313)view →
Mutation
RNA45SKCM (20)view →
Infiltrating cells1UCEC (1)view →