IGKV3D-25

associated omics data
immunoglobulin kappa variable 3D-25 (pseudogene)Genealiases: A6 · IGKV3D25

Q-omics provides the consensus-scored IGKV3D-25 profile across patient tissues and cancer cell-line models. IGKV3D-25 expression is associated with patient survival in 12 of 34 cancer types, with the highest sampling consensus in UCEC. Among the 18 cancer types available for tumor–normal comparison, IGKV3D-25 is differentially expressed in 5, with the highest sampling consensus in STAD. Additionally, IGKV3D-25 RNA expression shows 5,990 significant pathway-activity associations, with the highest sampling consensus in BRCA. Together, these results highlight UCEC, STAD, and BRCA as cancer lineages where IGKV3D-25 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV3D-25 survival associations across molecular data types. IGKV3D-25 RNA expression shows survival associations in the most cancer types (12). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV3D-25 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier12UCEC (72)view →
This table ranks reproducible IGKV3D-25 RNA expression–survival associations across cancer types. High IGKV3D-25 expression shows unfavorable associations in TGCT and KIRP, but favorable associations in UCEC, HNSC, ESCA and BLCA. The UCEC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .001). Together, the overview and detailed table identify UCEC as the clearest survival context for IGKV3D-25 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UCECDFSTertileIII,IV0.8320.481.00172view →
HNSCDFSTertileIII,IV0.8140.635.00669view →
ESCADFSTertileIII,IV0.6630.252.00957view →
TGCTOSTertileII,III,IV0.5010.996<.00154view →
KIRPOSTertileAll0.7020.902<.00139view →
BLCADFSTertileAll0.7240.275.00836view →
Pink = unfavorable, green = favorable. all 12 lineages →

IGKV3D-25-UCEC (DFS)

Kaplan–Meier survival curve for IGKV3D-25 RNA expression in UCEC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV3D-25 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5. The strongest signals are observed in STAD for RNA.
IGKV3D-25 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5STAD (6)view →
This table ranks reproducible tumor–normal expression differences for IGKV3D-25. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV3D-25 shows lower tumor expression in STAD, COAD, READ and BRCA and higher tumor expression in LUAD. The STAD box plot shows higher IGKV3D-25 RNA expression in normal versus tumor tissue (log2 FC = −0.661, t-test p = .008).
LineageGenderStageFold-changepSampling consensus
STADMaleAll−0.661.0086view →
LUADAllAll+0.305<.0015view →
COADAllIV−0.674.0203view →
READAllIII,IV−0.600.0212view →
BRCAAllAll−0.080.0152view →
Green = repressed in tumor. all 5 lineages →

IGKV3D-25-STAD

Tumor-vs-normal expression box plot for IGKV3D-25 in STAD.

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Cross-omics associations

This table shows molecular features associated with IGKV3D-25 in patient tissues and cancer cell lines. In patient samples, IGKV3D-25 shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)5,990BRCA (2761)view →
RNA4,266PAAD (1428)view →