IGKV2OR2-1

associated omics data
immunoglobulin kappa variable 2/OR2-1 (pseudogene)Genealiases: IGKV2/OR2-1 · IGKV2OR2-1A · IGKV2OR21 · IGKV2OR21A

Q-omics provides the consensus-scored IGKV2OR2-1 profile across patient tissues and cancer cell-line models. IGKV2OR2-1 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV2OR2-1 is differentially expressed in 9, with the highest sampling consensus in COAD. Additionally, IGKV2OR2-1 RNA expression shows 6,753 significant pathway-activity associations, with the highest sampling consensus in BRCA. Together, these results highlight HNSC, COAD, and BRCA as cancer lineages where IGKV2OR2-1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2OR2-1 survival associations across molecular data types. IGKV2OR2-1 RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2OR2-1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20HNSC (144)view →
This table ranks reproducible IGKV2OR2-1 RNA expression–survival associations across cancer types. High IGKV2OR2-1 expression shows unfavorable associations in GBM and LGG, but favorable associations in HNSC, OV, READ and SKCM. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV2OR2-1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianII,III,IV0.4100.260<.001144view →
OVDFSTertileII,III,IV0.6140.515.00958view →
READDFSTertileIII,IV1.0000.615<.00153view →
GBMOSTertileAll0.0580.416<.00136view →
SKCMOSTertileAll0.4420.292.00430view →
LGGDFSTertileAll0.4680.836<.00130view →
Pink = unfavorable, green = favorable. all 20 lineages →

IGKV2OR2-1-HNSC (DFS)

Kaplan–Meier survival curve for IGKV2OR2-1 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV2OR2-1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in COAD for RNA.
IGKV2OR2-1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9COAD (11)view →
This table ranks reproducible tumor–normal expression differences for IGKV2OR2-1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV2OR2-1 shows lower tumor expression in COAD, READ and BRCA and higher tumor expression in UCEC, KIRC and LUAD. The COAD box plot shows higher IGKV2OR2-1 RNA expression in normal versus tumor tissue (log2 FC = −1.398, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleII,III,IV−1.398<.00111view →
UCECAllII,III,IV+0.253.0228view →
READAllAll−1.373<.0015view →
KIRCAllAll+0.225.0065view →
LUADAllAll+0.711<.0014view →
BRCAFemaleAll−0.396<.0014view →
Green = repressed in tumor. all 9 lineages →

IGKV2OR2-1-COAD

Tumor-vs-normal expression box plot for IGKV2OR2-1 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGKV2OR2-1 in patient tissues and cancer cell lines. In patient samples, IGKV2OR2-1 shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,753BRCA (3881)view →
RNA5,376PAAD (1755)view →