IGKV2D-38

associated omics data
immunoglobulin kappa variable 2D-38 (pseudogene)Genealiases: IGKV2D38 · O3

Q-omics provides the consensus-scored IGKV2D-38 profile across patient tissues and cancer cell-line models. IGKV2D-38 expression is associated with patient survival in 4 of 34 cancer types, with the highest sampling consensus in LUSC. Additionally, IGKV2D-38 RNA expression shows 2,381 significant gene co-expression associations, with the highest sampling consensus in HNSC. Together, these results highlight LUSC, and HNSC as cancer lineages where IGKV2D-38 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2D-38 survival associations across molecular data types. IGKV2D-38 RNA expression shows survival associations in the most cancer types (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2D-38 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier4LUSC (36)view →
This table ranks reproducible IGKV2D-38 RNA expression–survival associations across cancer types. High IGKV2D-38 expression shows unfavorable associations in LUSC, BLCA and SKCM, but favorable associations in HNSC. The LUSC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .002). Together, the overview and detailed table identify LUSC as the clearest survival context for IGKV2D-38 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUSCOSTertileAll0.4020.672.00236view →
HNSCDFSTertileAll0.9680.685.00433view →
BLCAOSTertileAll0.1970.720.00427view →
SKCMDFSTertileIV0.0160.454<.00127view →
Pink = unfavorable, green = favorable. all 4 lineages →

IGKV2D-38-LUSC (OS)

Kaplan–Meier survival curve for IGKV2D-38 RNA expression in LUSC: high vs low expression groups.

Explore this curve interactively →

Cross-omics associations

This table shows molecular features associated with IGKV2D-38 in patient tissues and cancer cell lines. In patient samples, IGKV2D-38 shows the broadest associations at the RNA and protein expression levels, with HNSC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA2,381HNSC (1819)view →
Function (RNA)1,796HNSC (1311)view →