IGKV2D-23

associated omics data
immunoglobulin kappa variable 2D-23 (pseudogene)Genealiases: A8 · IGKV2D23

Q-omics provides the consensus-scored IGKV2D-23 profile across patient tissues and cancer cell-line models. IGKV2D-23 expression is associated with patient survival in 8 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, IGKV2D-23 is differentially expressed in 1, with the highest sampling consensus in THCA. Additionally, IGKV2D-23 RNA expression shows 5,460 significant gene co-expression associations, with the highest sampling consensus in ESCA. Together, these results highlight BLCA, THCA, and ESCA as cancer lineages where IGKV2D-23 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2D-23 survival associations across molecular data types. IGKV2D-23 RNA expression shows survival associations in the most cancer types (8). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2D-23 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier8BLCA (54)view →
This table ranks reproducible IGKV2D-23 RNA expression–survival associations across cancer types. High IGKV2D-23 expression shows unfavorable associations in UCEC, STAD, COAD and KIRC, but favorable associations in BLCA and SKCM. The BLCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .010). Together, the overview and detailed table identify BLCA as the clearest survival context for IGKV2D-23 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCAOSTertileIII,IV0.9600.638.01054view →
UCECDFSTertileAll0.4570.899<.00154view →
STADDFSTertileAll0.4580.667.00736view →
COADDFSTertileII,III,IV0.0860.747<.00127view →
SKCMDFSTertileIII,IV0.8590.232.00824view →
KIRCDFSTertileIV0.1000.631.02418view →
Pink = unfavorable, green = favorable. all 8 lineages →

IGKV2D-23-BLCA (OS)

Kaplan–Meier survival curve for IGKV2D-23 RNA expression in BLCA: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV2D-23 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 1. The strongest signals are observed in THCA for RNA.
IGKV2D-23 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot1THCA (2)view →
This table ranks reproducible tumor–normal expression differences for IGKV2D-23. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV2D-23 shows higher tumor expression in THCA. The THCA box plot shows higher IGKV2D-23 RNA expression in tumor versus normal tissue (log2 FC = +0.040, t-test p = .044).
LineageGenderStageFold-changepSampling consensus
THCAFemaleAll+0.040.0442view →
Green = repressed in tumor. all 1 lineages →

IGKV2D-23-THCA

Tumor-vs-normal expression box plot for IGKV2D-23 in THCA.

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Cross-omics associations

This table shows molecular features associated with IGKV2D-23 in patient tissues and cancer cell lines. In patient samples, IGKV2D-23 shows the broadest associations at the RNA and protein expression levels, with ESCA recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA5,460ESCA (2523)view →
Function (RNA)2,248THCA (948)view →