IGKV2D-10

associated omics data
immunoglobulin kappa variable 2D-10 (pseudogene)Genealiases: IGKV2D10 · L21

Q-omics provides the consensus-scored IGKV2D-10 profile across patient tissues and cancer cell-line models. IGKV2D-10 expression is associated with patient survival in 9 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV2D-10 is differentially expressed in 3, with the highest sampling consensus in BRCA. Additionally, IGKV2D-10 RNA expression shows 4,685 significant pathway-activity associations, with the highest sampling consensus in STAD. Together, these results highlight HNSC, BRCA, and STAD as cancer lineages where IGKV2D-10 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2D-10 survival associations across molecular data types. IGKV2D-10 RNA expression shows survival associations in the most cancer types (9). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2D-10 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier9HNSC (42)view →
This table ranks reproducible IGKV2D-10 RNA expression–survival associations across cancer types. High IGKV2D-10 expression shows unfavorable associations in HNSC, LIHC, LUAD, LUSC and UCEC, but favorable associations in BRCA. The HNSC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV2D-10 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSTertileIII,IV0.3840.703.00142view →
LIHCOSTertileII,III,IV0.1190.617.02127view →
LUADDFSTertileIV0.3420.893<.00118view →
LUSCOSTertileIII,IV0.1630.662.01612view →
BRCAOSTertileII,III,IV0.9910.953.02712view →
UCECDFSTertileAll0.8190.901.02912view →
Pink = unfavorable, green = favorable. all 9 lineages →

IGKV2D-10-HNSC (OS)

Kaplan–Meier survival curve for IGKV2D-10 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV2D-10 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 3. The strongest signals are observed in BRCA for RNA.
IGKV2D-10 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot3BRCA (4)view →
This table ranks reproducible tumor–normal expression differences for IGKV2D-10. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV2D-10 shows lower tumor expression in BRCA, LIHC and LUSC. The BRCA box plot shows higher IGKV2D-10 RNA expression in normal versus tumor tissue (log2 FC = −0.047, t-test p = .005).
LineageGenderStageFold-changepSampling consensus
BRCAAllII,III,IV−0.047.0054view →
LIHCMaleAll−0.028.0402view →
LUSCFemaleAll−0.075.0441view →
Green = repressed in tumor. all 3 lineages →

IGKV2D-10-BRCA

Tumor-vs-normal expression box plot for IGKV2D-10 in BRCA.

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Cross-omics associations

This table shows molecular features associated with IGKV2D-10 in patient tissues and cancer cell lines. In patient samples, IGKV2D-10 shows the broadest associations at the RNA and protein expression levels, with STAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)4,685STAD (2851)view →
RNA3,688THCA (1301)view →