IGKV2D-10

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV2D-10 RNA differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of IGKV2D-10’s most consistent transcriptional readouts.

The strongest signal is observed in breast invasive carcinoma (BRCA), where IGKV2D-10 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV2D-10 is over-expressed in tumor, although a few such as BRCA and LIHC show the opposite, repressed pattern.

BRCA, LIHC, and LUSC are the cancer types where IGKV2D-10 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV2D-10 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BRCAAllII,III,IV−0.047.0054view →
LIHCMaleAll−0.028.0402view →
LUSCFemaleAll−0.075.0441view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

IGKV2D-10–BRCA

Tumor-vs-normal expression box plot for IGKV2D-10 RNA in BRCA.

Open the BRCA breakdown →

Exploration