IGKV1OR2-6

associated omics data
immunoglobulin kappa variable 1/OR2-6 (pseudogene)Genealiases: IGKV1/OR2-6 · IGKV1OR26

Q-omics provides the consensus-scored IGKV1OR2-6 profile across patient tissues and cancer cell-line models. IGKV1OR2-6 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV1OR2-6 is differentially expressed in 5, with the highest sampling consensus in COAD. Additionally, IGKV1OR2-6 RNA expression shows 8,196 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight HNSC, COAD, and TGCT as cancer lineages where IGKV1OR2-6 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV1OR2-6 survival associations across molecular data types. IGKV1OR2-6 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV1OR2-6 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24HNSC (131)view →
This table ranks reproducible IGKV1OR2-6 RNA expression–survival associations across cancer types. High IGKV1OR2-6 expression shows unfavorable associations in UVM and KIRP, but favorable associations in HNSC, SKCM, BRCA and COAD. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV1OR2-6 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSMedianAll0.7590.612<.001131view →
SKCMOSTertileAll0.4150.281<.001114view →
BRCADFSTertileAll0.5910.482<.00169view →
UVMDFSTertileAll0.5030.781.02645view →
KIRPOSQuartileAll0.4710.783.00130view →
COADDFSMedianAll0.7510.636.00528view →
Pink = unfavorable, green = favorable. all 24 lineages →

IGKV1OR2-6-HNSC (OS)

Kaplan–Meier survival curve for IGKV1OR2-6 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV1OR2-6 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5. The strongest signals are observed in COAD for RNA.
IGKV1OR2-6 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5COAD (12)view →
This table ranks reproducible tumor–normal expression differences for IGKV1OR2-6. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV1OR2-6 shows lower tumor expression in COAD, BRCA and READ and higher tumor expression in LUAD and KIRC. The COAD box plot shows higher IGKV1OR2-6 RNA expression in normal versus tumor tissue (log2 FC = −3.192, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADAllIV−3.192<.00112view →
LUADFemaleAll+1.602<.0016view →
BRCAFemaleII,III,IV−0.724<.0016view →
KIRCAllAll+0.482.0034view →
READFemaleAll−2.932<.0012view →
Green = repressed in tumor. all 5 lineages →

IGKV1OR2-6-COAD

Tumor-vs-normal expression box plot for IGKV1OR2-6 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGKV1OR2-6 in patient tissues and cancer cell lines. In patient samples, IGKV1OR2-6 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA8,196TGCT (2660)view →
Function (RNA)7,079BRCA (4185)view →