IGHV4-34

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV4-34 mutation is significantly associated with the RNA expression of many other genes, with 83 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IGHV4-34-associated genes across cancer lineages are RNU6-206P, MIR4507, and AQP7P4. Each is linked with IGHV4-34 in more than 2 cancer types. Because this analysis shows association rather than direction, both IGHV4-34-to-partner and partner-to-IGHV4-34 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV4-34→partner) and Y-score (partner→IGHV4-34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-206P →+0.372+5.245<.001.00233
HNSCMIR4507 →+0.685+4.748<.001.00332
HNSCAQP7P4 →+0.067+5.111<.001.00432
UCECRNU1-57P →+0.466+5.470<.001.00132
UCECSNORD116-23 →+0.924+4.169<.001.00232
UCECRNU6-906P →+0.781+3.671<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 83 associations by consensus.

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